Ageorges, V., Wawrzyniak, I., Ruiz, P., Bicep, C., Zorgani, M. A., Paxman, J. J., Heras, B., Henderson, I. R., Leroy, S., Bailly, X., Sapountzis, P., Peyretaillade, E., & Desvaux, M. (2023). Genome-Wide Analysis of Antigen 43 (Ag43) Variants : New Insights in Their Diversity, Distribution and Prevalence in Bacteria. International Journal of Molecular Sciences, 24(6), 5500. https://doi.org/10.3390/ijms24065500
Andretto, V., Taurino, G., Guerriero, G., Guérin, H., Lainé, E., Bianchi, M. G., Agusti, G., Briançon, S., Bussolati, O., Clayer-Montembault, A., & Lollo, G. (2023). Nanoemulsions Embedded in Alginate Beads as Bioadhesive Nanocomposites for Intestinal Delivery of the Anti-Inflammatory Drug Tofacitinib. Biomacromolecules, 24(6), 2892-2907. https://doi.org/10.1021/acs.biomac.3c00260
Borrel, G., Fadhlaoui, K., Ben Hania, W., Gaci, N., Pehau-Arnaudet, G., Chaudhary, P. P., Vandekerckove, P., Ballet, N., Alric, M., O’Toole, P. W., Fardeau, M.-L., Ollivier, B., & Brugère, J.-F. (2023). Methanomethylophilus alvi gen. Nov., sp. Nov., a Novel Hydrogenotrophic Methyl-Reducing Methanogenic Archaea of the Order Methanomassiliicoccales Isolated from the Human Gut and Proposal of the Novel Family Methanomethylophilaceae fam. Nov. Microorganisms, 11(11), 2794. https://doi.org/10.3390/microorganisms11112794
Boulier, A., Denis, S., Henry, G., Guérin, S., Alric, M., Meunier, N., Blot, A., Pereira, B., Malpuech-Brugere, C., Remond, D., Boirie, Y., Baniel, A., Richard, R., Dupont, D., & Boudry, G. (2023). Casein structures differently affect postprandial amino acid delivery through their intra-gastric clotting properties. Food Chemistry, 415, 135779. https://doi.org/10.1016/j.foodchem.2023.135779
Cantalapiedra-Hijar, G., Martinez-Fernandez, G., Forano, E., Denman, S. E., Morgavi, D., & McSweeney, C. S. (2023). The extent of nitrogen isotopic fractionation in rumen bacteria is associated with changes in rumen nitrogen metabolism. PLOS ONE, 18(9), e0291243
Comtet-Marre, S., Chakoory, O., Peyret, P. (2023). Targeted 16S rRNA Gene Capture by Hybridization and Bioinformatic Analysis. In: Martin, F., Uroz, S. (eds) Microbial Environmental Genomics (MEG). Methods in Molecular Biology, vol 2605. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-2871-3_10
De Sousa, T., Garcês, A., Silva, A., Lopes, R., Alegria, N., Hébraud, M., Igrejas, G., & Poeta, P. (2023). The Impact of the Virulence of Pseudomonas aeruginosa Isolated from Dogs. Veterinary Sciences, 10(5), 343. https://doi.org/10.3390/vetsci10050343
De Sousa, T., Hébraud, M., Alves, O., Costa, E., Maltez, L., Pereira, J. E., Martins, Â., Igrejas, G., & Poeta, P. (2023). Study of Antimicrobial Resistance, Biofilm Formation, and Motility of Pseudomonas aeruginosa Derived from Urine Samples. Microorganisms, 11(5), 1345. https://doi.org/10.3390/microorganisms11051345
De Sousa, T., Silva, C., Alves, O. Costa, E., Igrejas, G., Poeta, P., Hébraud, M. (2023). Determination of Antimicrobial Resistance and the Impact of Imipenem + Cilastatin Synergy with Tetracycline in Pseudomonas aeruginosa Isolates from Sepsis. Microorganisms 2023, 11, 2687. https://doi.org/10.3390/microorganisms11112687
Delbaere, K., Roegiers, I., Bron, A., Durif, C., Van De Wiele, T., Blanquet-Diot, S., & Marinelli, L. (2023). The small intestine : Dining table of host-microbiota meetings. FEMS Microbiology Reviews, fuad022. https://doi.org/10.1093/femsre/fuad022
Deschamps, C., Denis, S., Humbert, D., Apper, E., Blanquet-Diot, S. (2023). Systèmes digestifs artificiels : applications en nutrition et santé canine. Bulletin de l'Académie Vétérinaire de France, 176. https://doi.org/10.3406/bavf.2023.71041
Dunière, L., Ruiz, P., Lebbaoui, Y., Guillot, L., Bernard, M., Forano, E., Chaucheyras-Durand, F. (2023). Effects of rearing mode on gastro-intestinal microbiota and development, immunocompetence, sanitary status and growth performance of lambs from birth to two months of age. Animal Microbiome, 2023, 5(1),34. https://doi.org/10.1186/s42523-023-00255-7
Etienne-Mesmin, L., Meslier, V., Uriot, O., Fournier, E., Deschamps, C., Denis, S., David, A., Jegou, S., Morabito, C., Quinquis, B., Thirion, F., Plaza Oñate, F., Le Chatelier, E., Ehrlich, S. D., Blanquet-Diot, S., & Almeida, M. (2023). In Vitro Modelling of Oral Microbial Invasion in the Human Colon. Microbiology Spectrum, e04344-22. https://doi.org/10.1128/spectrum.04344-22
Fakih, I., Got, J., Robles-Rodriguez, C. E., Siegel, A., Forano, E., & Muñoz-Tamayo, R. (2023). Dynamic genome-based metabolic modeling of the predominant cellulolytic rumen bacterium Fibrobacter succinogenes S85. MSystems, e01027-22. https://doi.org/10.1128/msystems.01027-22
Fournier, E., Leveque, M., Ruiz, P., Ratel, J., Durif, C., Chalancon, S., Amiard, F., Edely, M.E., Bézirard, V., Gaultier, E., Lamas, B., Houdeau, E., Lagarde, F., Engel, E., Etienne-Mesmin, L., Blanquet-Diot, S., Mercier-Bonin, M. (2023). Microplastics: What happens in the human digestive tract? First evidences in adults using in vitro gut models. Journal of Hazardous Materials, 2023, 442, pp.130010. https://doi.org/10.1016/j.jhazmat.2022.130010
Fournier E., Ratel J., Denis S., Leveque M., Ruiz Ph., Mazal C., Amiard F., Edely M., Bezirard V., Gaultier E., Lamas B., Houdeau E., Engel E., Lagarde F., Etienne-Mesmin L., Mercier-Bonin M., Blanquet-Diot S. (2023). Exposure to polyethylene microplastics alters immature gut microbiome in an infant in vitro gut model. Journal of Hazardous Materials, 443 (Part B), 130383. https://doi.org/10.1016/j.jhazmat.2022.130383.
Gamsjäger, L., Cirone, K. M., Schluessel, S., Campsall, M., Herik, A., Lahiri, P., Young, D., Dufour, A., Sapountzis, P., Otani, S., Gomez, D. E., Windeyer, M. C., & Cobo, E. R. (2023). Host innate immune responses and microbiome profile of neonatal calves challenged with Cryptosporidium parvum and the effect of bovine colostrum supplementation. Frontiers in Cellular and Infection Microbiology, 13, 1165312
Hernandez-Patlan, D., Solis-Cruz, B., Latorre, J. D., Maguey-Gonzalez, J. A., Castellanos-Huerta, I., Beyssac, E., Garrait, G., Vázquez-Durán, A., López-Arellano, R., Méndez-Albores, A., Hargis, B. M., & Tellez-Isaias, G. (2023). Evaluation of the Antimicrobial Activity of a Formulation Containing Ascorbic Acid and Eudragit FS 30D Microparticles for the Controlled Release of a Curcumin–Boric Acid Solid Dispersion in Turkey Poults Infected with Salmonella enteritidis : A Therapeutic Model. International Journal of Molecular Sciences, 24(22), 16186. https://doi.org/10.3390/ijms242216186
Herviou, P., Balvay, A., Bellet, D., Bobet, S., Maudet, C., Staub, J., Alric, M., Leblond-Bourget, N., Delorme, C., Rabot, S., Denis, S., & Payot, S. (2023). Transfer of the Integrative and Conjugative Element ICE St3 of Streptococcus thermophilus in Physiological Conditions Mimicking the Human Digestive Ecosystem. Microbiology Spectrum, e04667-22. https://doi.org/10.1128/spectrum.04667-22
Hor, L., Pilapitiya, A., McKenna, J. A., Panjikar, S., Anderson, M. A., Desvaux, M., Paxman, J. J., & Heras, B. (2023). Crystal structure of a subtilisin-like autotransporter passenger domain reveals insights into its cytotoxic function. Nature Communications, 14(1), 1163. https://doi.org/10.1038/s41467-023-36719-2
Lebrat, M., Bouattour, Y., Gaudet, C., Yessaad, M., Jouannet, M., Wasiak, M., Dhifallah, I., Beyssac, E., Garrait, G., Chennell, P., & Sautou, V. (2023). Development and Stability of a New Formulation of Pentobarbital Suppositories for Paediatric Procedural Sedation. Pharmaceutics, 15(3), 755. https://doi.org/10.3390/pharmaceutics15030755
Monteiro, R., Chafsey, I., Caccia, N., Ageorges, V., Leroy, S., Viala, D., Hébraud, M., Livrelli, V., Pizza, M., Pezzicoli, A., & Desvaux, M. (2023). Specific Proteomic Identification of Collagen-Binding Proteins in Escherichia coli O157:H7 : Characterisation of OmpA as a Potent Vaccine Antigen. Cells, 12(12), 1634. https://doi.org/10.3390/cells12121634
Moreira de Gouveia M-I., Daniel J., Garrivier A., Bernalier-Donadille A., Jubelin G. (2023). Diversity of ethanolamine utilization by human commensal Escherichia coli. Research in Microbiology, 2023, 174 (1-2), pp.103989. https://doi.org/10.1016/j.resmic.2022.103989
Moreira De Gouveia, M. I., Reuter, A., Garrivier, A., Daniel, J., Bernalier-Donadille, A., & Jubelin, G. (2023). Design and validation of a dual-fluorescence reporter system to monitor bacterial gene expression in the gut environment. Applied Microbiology and Biotechnology. https://doi.org/10.1007/s00253-023-12788-7
Muñoz-Tamayo, R., Davoudkhani, M., Fakih, I., Robles-Rodriguez, C. E., Rubino, F., Creevey, C. J., & Forano, E. (2023). Review : Towards the next-generation models of the rumen microbiome for enhancing predictive power and guiding sustainable production strategies. Animal, 17, 100984. https://doi.org/10.1016/j.animal.2023.100984
Paris, L., Devers-Lamrani, M., Joly, M., Viala, D., De Antonio, M., Pereira, B., Rouard, N., Besse-Hoggan, P., Hébraud, M., Topp, E., Martin-Laurent, F., & Batisson, I. (2023). Effect of subtherapeutic and therapeutic sulfamethazine concentrations on transcribed genes and translated proteins involved in Microbacterium sp. C448 resistance and degradation. FEMS Microbiology Ecology, fiad064. https://doi.org/10.1093/femsec/fiad064
Poimenidou S.V., Caccia N., Paramithiotis S., Hebraud M., Nychas G.J., Skandamis P.N. (2023). Influence of temperature on regulation of key virulence and stress response genes in Listeria monocytogenes biofilms. Food Microbiology (11) 104190. https://doi.org/10.1016/j.fm.2022.104190
Rodríguez, M.F., Gomez, A.P., Parra-Giraldo, C.M., Ceballos-Garzon, A. (2023). Proteomics and Genetic Approaches Elucidate the Circulation of Low Variability Staphylococcus aureus Strains on Colombian Dairy Farms. Microb Ecol 86, 2320–2329. https://doi.org/10.1007/s00248-023-02234-6
Sadek, A., Taminiau, B., Daube, G., Sapountzis, P., Chaucheyras-Durand, F., Castex, M., Coucheney, F., & Drider, D. (2023). Impact of Dietary Regime and Seasonality on Hindgut’s Mycobiota Diversity in Dairy Cows. Microorganisms, 12(1), 84. https://doi.org/10.3390/microorganisms12010084
Saint Martin, C., Caccia, N., Darsonval, M., Gregoire, M., Combeau, A., Jubelin, G., Dubois-Brissonnet, F., Leroy, S., Briandet, R., & Desvaux, M. (2023). Spatially localised expression of the glutamate decarboxylase gadB in Escherichia coli O157:H7 microcolonies in hydrogel matrices. Npj Science of Food, 7(1), 55. https://doi.org/10.1038/s41538-023-00229-8
Suriyaprom, S., Srisai, P., Intachaisri, V., Kaewkod, T., Pekkoh, J., Desvaux, M., & Tragoolpua, Y. (2023). Antioxidant and Anti-Inflammatory Activity on LPS-Stimulated RAW 264.7 Macrophage Cells of White Mulberry (Morus alba L.) Leaf Extracts. Molecules, 28(11), 4395. https://doi.org/10.3390/molecules28114395
Verdier-Metz, I., Delbès, C., Bouchon, M., Rifa, E., Theil, S., Chaucheyras-Durand, F., Chevaux, E., Dunière, L., & Chassard, C. (2023). Dietary Live Yeast Supplementation Influence on Cow’s Milk, Teat and Bedding Microbiota in a Grass-Diet Dairy System. Microorganisms, 11(3), 673. https://doi.org/10.3390/microorganisms11030673
Vincentini, O., Blier, A.L., Bogni, A., Brun, M., Cecchetti, S., De Battistis, F., Denis, S., Etienne-Mesmin, L., Ferraris, F., Sirio Fumagalli, F., Hogeveen, K., Iacoponi, F., Moracci, G., Raggi, A., Siciliani, L., Stanco, D., Verleysen, E., Fessard, V., Mast, J., Blanquet-Diot, S., Bremer-Hoffmann, S., Cubadda, F. (2023). EFSA Project on the use of New Approach Methodologies (NAMs) for the hazard assessment of nanofibres. Lot 1, nanocellulose oral exposure: gastrointestinal digestion, nanofibres uptake and local effects. EFSA supporting publication 20(9):EN-8258. 49 pp. https://doi.org/10.2903/sp.efsa.2023.EN-8258
