2017

2017

Atia A, Gomma AI, Fliss I, Beyssac E, Garrait G and Subirade M. 2017. Molecular and biopharmaceutical investigation of alginate-inulin synbiotic coencapsulation of probiotic to target the colon. Journal of Microencapsulation 34 (2): 171-184. DOI : 10.1080/02652048.2017.1313330

Auffret P, Segura A, Bertin Y, Klopp C, Bouchez O, Kerouredan M, Bibbal D, Brugere H and Forano E. 2017. Draft genome sequence of enterohemorrhagic Escherichia coli O157:H7 strain MC2 isolated from cattle in France. Genome announcements 5 (40) DOI : 10.1128/genomeA.01097-17

Azeredo J, Azevedo NF, Briandet R, Cerca N, Coenye T, Costa AR, Desvaux M, Di Bonaventura G, Hebraud M, Jaglic Z, Kacaniova M, Knochel S, Lourenco A, Mergulhao F, Meyer RL, Nychas G, Simoes M, Tresse O and Sternberg C. 2017. Critical review on biofilm methods. Critical Reviews in Microbiology 43 (3): 313-351. DOI : 10.1080/1040841x.2016.1208146

Azpiroz F, Dubray C, Bernalier-Donadille A, Cardot JM, Accarino A, Serra J, Wagner A, Respondek F and Dapoigny M. 2017. Effects of scFOS on the composition of fecal microbiota and anxiety in patients with irritable bowel syndrome: a randomized, double blind, placebo controlled study. Neurogastroenterology and Motility 29 (2): e12911. DOI : 10.1111/nmo.12911

Belkorchia A, Pombert J-F, Polonais V, Parisot N, Delbac F, Brugere J-F, Peyret P, Gaspin C and Peyretaillade E. 2017. Comparative genomics of microsporidian genomes reveals a minimal non-coding RNA set and new insights for transcription in minimal eukaryotic genomes. DNA Research 24 (3): 251-260. DOI : 10.1093/dnares/dsx002

Bertin Y, Habouzit C, Duniere L, Laurier M, Durand A, Duchez D, Segura A, Thevenot-Sergentet D, Baruzzi F, Chaucheyras-Durand F and Forano E. 2017. Lactobacillus reuteri suppresses E. coli O157:H7 in bovine ruminal fluid: Toward a pre-slaughter strategy to improve food safety? PLoS One 12 (11): e0187229. DOI : 10.1371/journal.pone.0187229

Bingula R, Filaire M, Radosevic-Robin N, Bey M, Berthon JY, Bernalier-Donadille A, Vasson MP and Filaire E. 2017. Desired Turbulence? Gut-Lung Axis, Immunity, and Lung Cancer. Journal of Oncology 2017: 1-15. DOI : 10.1155/2017/5035371

Borrel G, Mccann A, Deane J, Neto MC, Lynch DB, Brugere J-F and O'toole PW. 2017. Genomics and metagenomics of trimethylamine-utilizing Archaea in the human gut microbiome. Isme Journal 11 (9): 2059-2074. DOI : 10.1038/ismej.2017.72

Cardot JM, Roudier B and Schuetz H. 2017. Dissolution comparisons using a Multivariate Statistical Distance (MSD) test and a comparison of various approaches for calculating the measurements of dissolution profile comparison. Aaps Journal 19 (4): 1091-1101. DOI : 10.1208/s12248-017-0063-y

Chagnot C, Venien A, Renier S, Caccia N, Talon R, Astruc T and Desvaux M. 2017. Colonisation of Meat by Escherichia coli O157:H7: Investigating Bacterial Tropism with Respect to the Different Types of Skeletal Muscles, Subtypes of Myofibres, and Postmortem Time. Frontiers in Microbiology 8: 1366. DOI : 10.3389/fmicb.2017.01366

Comtet-Marre S, Parisot N, Lepercq P, Chaucheyras-Durand F, Mosoni P, Peyretaillade E, Bayat AR, Shingfield KJ, Peyret P and Forano E. 2017. Metatranscriptomics reveals the active bacterial and eukaryotic fibrolytic communities in the rumen of dairy cow fed a mixed diet. Frontiers in Microbiology 8: 67. DOI : 10.3389/fmicb.2017.00067

Cordonnier C, Etienne-Mesmin L, Thevenot J, Rougeron A, Renier S, Chassaing B, Darfeuille-Michaud A, Barnich N, Blanquet-Diot S and Livrelli V. 2017. Enterohemorrhagic Escherichia coli pathogenesis: role of Long polar fimbriae in Peyer's patches interactions. Scientific Reports 7: 44655. DOI : 10.1038/srep44655

Cordonnier C, Thevenot J, Etienne-Mesmin L, Alric M, Livrelli V and Blanquet-Diot S. 2017. Probiotic and enterohemorrhagic Escherichia coli: An effective strategy against a deadly enemy? Critical Reviews in Microbiology 43 (1): 116-132. DOI : 10.1080/1040841x.2016.1185602

Correia S, Hebraud M, Chafsey I, Chambon C, Viala D, Saenz Y, Capelo JL, Poeta P and Igrejas G. 2017. Comparative subproteomic analysis of clinically acquired fluoroquinolone resistance and ciprofloxacin stress in Salmonella Typhimurium DT104B. Proteomics Clinical Applications 11 (7-8):. DOI : 10.1002/prca.201600107

Correia S, Hébraud M, Chafsey I, Chambon C, Viala D, Torres C, Caniça M, Capelo JL, Poeta P and Igrejas G. 2017. Subproteomic signature comparison of in vitro selected fluoroquinolone resistance and ciprofloxacin stress in Salmonella Typhimurium DT104B. Expert Review of Proteomics 14 (10): 941-961. DOI : 10.1080/14789450.2017.1375856

Correia S, Poeta P, Hebraud M, Capelo JL and Igrejas G. 2017. Mechanisms of quinolone action and resistance: where do we stand? Journal of Medical Microbiology 66 (5): 551-559. DOI : 10.1099/jmm.0.000475

Defois C, Ratel J, Denis S, Batut B, Beugnot R, Peyretaillade E, Engel E and Peyret P. 2017. Environmental Pollutant Benzo a Pyrene Impacts the Volatile Metabolome and Transcriptome of the Human Gut Microbiota. Frontiers in Microbiology 8: 1562. DOI : 10.3389/fmicb.2017.01562

Duniere L, Xu S, Long J, Elekwachi C, Wang Y, Turkington K, Forster R and Mcallister TA. 2017. Bacterial and fungal core microbiomes associated with small grain silages during ensiling and aerobic spoilage. Bmc Microbiology 17:. DOI : 10.1186/s12866-017-0947-0

Etienne-Mesmin L, Chassaing B and Gewirtz AT. 2017. Tryptophan: A gut microbiota-derived metabolites regulating inflammation. World journal of gastrointestinal pharmacology and therapeutics 8 (1): 7-9. DOI : 10.4292/wjgpt.v8.i1.7

Etienne-Mesmin L, Chassaing B, Adekunle O, Mattei LM, Edwards AN, Mcbride SM, Bushman FD and Gewirtz AT. 2017. Genome Sequence of a Toxin-Positive Clostridium difficile Strain Isolated from Murine Feces. Genome announcements 5 (14). DOI : 10.1128/genomeA.00088-17

Etienne-Mesmin L. 2017. Clostridium difficile: the beauty and the beast. Medecine sciences : M/S 33 (10): 825-828. DOI : 10.1051/medsci/20173310005

Ferraro V, Gaillard-Martinie B, Sayd T, Chambon C, Anton M and Santé-Lhoutellier V. 2017. Collagen type I from bovine bone. Effect of animal age, bone anatomy and drying methodology on extraction yield, self-assembly, thermal behaviour and electrokinetic potential. International Journal of Biological Macromolecules 97: 55-66. DOI : 10.1016/j.ijbiomac.2016.12.068

Flemer B, Gaci N, Borrel G, Sanderson IR, Chaudhary PP, Tottey W, O'toole PW and Brugere J-F. 2017. Fecal microbiota variation across the lifespan of the healthy laboratory rat. Gut microbes 8 (5): 428-439. DOI : 10.1080/19490976.2017.1334033

Fleury MA, Le Goff O, Denis S, Chaucheyras-Durand F, Jouy E, Kempf I, Alric M and Blanquet-Diot S. 2017. Development and validation of a new dynamic in vitro model of the piglet colon (PigutIVM): application to the study of probiotics. Applied Microbiology and Biotechnology 101 (6): 2533-2547. DOI : 10.1007/s00253-017-8122-y

Gaci N, Chaudhary PP, Tottey W, Alric M and Brugere J-F. 2017. Functional amplification and preservation of human gut microbiota. Microbial ecology in health and disease 28 (1): 1308070-1308070. DOI : 10.1080/16512235.2017.1308070

Galia W, Leriche F, Cruveiller S, Garnier C, Navratil V, Dubost A, Blanquet-Diot S and Thevenot-Sergentet D. 2017. Strand-specific transcriptomes of Enterohemorrhagic Escherichia coli in response to interactions with ground beef microbiota: interactions between microorganisms in raw meat. Bmc Genomics 18 (1): 574. DOI : 10.1186/s12864-017-3957-2

Gasc C and Peyret P. 2017. Revealing large metagenomic regions through long DNA fragment hybridization capture. Microbiome 5 (1): 33. DOI : 10.1186/s40168-017-0251-0

Gasc C, Constantin A, Jaziri F and Peyret P. 2017. OCaPPI-Db: an oligonucleotide probe database for pathogen identification through hybridization capture. Database : the journal of biological databases and curation 2017 (1):. DOI : 10.1093/database/baw172

Gauthier P. 2017. A complete world of design adaptation and product specificities for injectable drug delivery. Therapeutic Delivery 8 (11): 933-937. DOI : 10.4155/tde-2017-0080

Gresse R, Chaucheyras-Durand F, Fleury MA, Van De Wiele T, Forano E and Blanquet-Diot S. 2017. Gut Microbiota Dysbiosis in Postweaning Piglets: Understanding the Keys to Health. Trends in Microbiology 25 (10): 851-873. DOI : 10.1016/j.tim.2017.05.004

Hsein H, Garrait G, Mumin MA, Beyssac E and Hoffart V. 2017. Atomization of denatured whey proteins as a novel and simple way to improve oral drug delivery system properties. International journal of biological macromolecules 105: 801-8096. DOI : 10.1016/j.ijbiomac.2017.07.114

Hsein H, Garrait G, Tamani F, Beyssac E and Hoffart V. 2017. Denatured Whey Protein Powder as a New Matrix Excipient: Design and Evaluation of Mucoadhesive Tablets for Sustained Drug Release Applications. Pharmaceutical Research 34 (2): 365-377. DOI : 10.1007/s11095-016-2067-1

Ladeveze S, Laville E, Despres J, Mosoni P and Potocki-Veronese G. 2017. Mannoside recognition and degradation by bacteria. Biological Reviews 92 (4): 1969-1990. DOI : 10.1111/brv.12316

Laranjo M, Talon R, Laukova A, Fraqueza MJ and Elias M. 2017. Traditional Meat Products: Improvement of Quality and Safety. Journal of Food Quality 2017 (ID2873793): 2 pages. DOI : 10.1155/2017/2873793

Le Bihan G, Sicard JF, Garneau P, Bernalier-Donadille A, Gobert AP, Garrivier A, Martin C, Hay AG, Beaudry F, Harel J and Jubelin G. 2017. The NAG Sensor NagC Regulates LEE Gene Expression and Contributes to Gut Colonization by Escherichia coli O157:H7. Frontiers in Cellular and Infection Microbiology 7: 134. DOI : 10.3389/fcimb.2017.00134

Lee B-H, Hébraud M and Bernardi T. 2017. Increased Adhesion of Listeria monocytogenes Strains to Abiotic Surfaces under Cold Stress. Frontiers in Microbiology 8: 2221. DOI : 10.3389/fmicb.2017.02221

Leroy S, Vermassen A, Ras G and Talon R. 2017. Insight into the Genome of Staphylococcus xylosus, a Ubiquitous Species Well Adapted to Meat Products. Microorganisms 5 (3):. DOI : 10.3390/microorganisms5030052

Meale SJ, Chaucheyras-Durand F, Berends H, Guan LL and Steele MA. 2017. From pre- to postweaning: Transformation of the young calf's gastrointestinal tracT. Journal of Dairy Science 100 (7): 5984-5995. DOI : 10.3168/jds.2016-12474

Mouammine A, Pages S, Lanois Nouri A, Gaudriault S, Jubelin G, Bonabaud M, Cruveiller S, Dubois E, Roche D, Legrand L, Brillard J and Givaudan A. 2017. An antimicrobial peptide-resistant minor subpopulation of Photorhabdus luminescens is responsible for virulence. Scientific Reports 7: 43670. DOI : 10.1038/srep43670

Pestieau A, Lebrun S, Cahay B, Brouwers A, Streel B, Cardot J-M and Evrard B. 2017. Evaluation of different in vitro dissolution tests based on level A in vitro-in vivo correlations for fenofibrate self-emulsifying lipid-based formulations. European Journal of Pharmaceutics and Biopharmaceutics 112: 18-29. DOI : 10.1016/j.ejpb.2016.10.030

Philippe C, Wauquier F, Landrier JF, Bonnet L, Miot‐Noirault E, Rochefort GY, Sadoine J, Asrih M, Jornayvaz FR, Bernalier A, Coxam V and Wittrant Y. 2017. GPR40 mediates potential positive effects of a saturated fatty acid enriched diet on bone. Molecular Nutrition & Food Research 61 (2):. DOI : 10.1002/mnfr.201600219

Popowska M, Krawczyk-Balska A, Ostrowski R and Desvaux M. 2017. InlL from Listeria monocytogenes Is Involved in Biofilm Formation and Adhesion to Mucin. Frontiers in Microbiology 8:. DOI : 10.3389/fmicb.2017.00660

Ranchou-Peyruse M, Gasc C, Guignard M, Aullo T, Dequidt D, Peyret P and Ranchou-Peyruse A. 2017. The sequence capture by hybridization: a new approach for revealing the potential of mono-aromatic hydrocarbons bioattenuation in a deep oligotrophic aquifer. Microbial Biotechnology 10 (2): 469-479. DOI : 10.1111/1751-7915.12426

Ras G, Zuliani V, Derkx P, Seibert TM, Leroy S and Talon R. 2017. Evidence for Nitric Oxide Synthase Activity in Staphylococcus xylosus Mediating Nitrosoheme Formation. Frontiers in Microbiology 8:. DOI : 10.3389/fmicb.2017.00598

Ratsimba A, Leroy S, Chacornac JP, Rakoto D, Arnaud E, Jeannoda V and Talon R. 2017. Staphylococcal ecosystem of kitoza, a traditional malagasy meat product. International Journal of Food Microbiology 246: 20-24. DOI : 10.1016/j.ijfoodmicro.2017.02.001

Roussel C, Sivignon A, Van De Wiele T and Blanquet-Diot S. 2017. Foodborne enterotoxigenic Escherichia coli: from gut pathogenesis to new preventive strategies involving probiotics. Future Microbiology 12 (1): 73-93. DOI : 10.2217/fmb-2016-0101

Segura A, Auffret P, Klopp C, Bertin Y and Forano E. 2017. Draft genome sequence and characterization of commensal Escherichia coli strain BG1 isolated from bovine gastro-intestinal tract. Standards in Genomic Sciences 12 (1): 61. DOI : 10.1186/s40793-017-0272-0

Shani-Levi C, Alvito P, Andres A, Assuncao R, Barbera R, Blanquet-Diot S, Bourlieu C, Brodkorb A, Cilla A, Deglaire A, Denis S, Dupont D, Heredia A, Karakaya S, Giosafatto CVL, Mariniello L, Martins C, Menard O, El SN, Vegarud GE, Ulleberg E and Lesmes U. 2017. Extending in vitro digestion models to specific human populations: Perspectives, practical tools and bio-relevant information. Trends in Food Science & Technology 60: 52-63. DOI : 10.1016/j.tifs.2016.10.017

Solis-Cruz B, Hernandez-Patlan D, Beyssac E, Latorre JD, Hernandez-Velasco X, Merino-Guzman R, Tellez G and Lopez-Arellano R. 2017. Evaluation of chitosan and cellulosic polymers as binding adsorbent materials to prevent aflatoxin B1, fumonisin B1, ochratoxin, trichothecene, deoxynivalenol, and zearalenone mycotoxicoses through an in vitro gastrointestinal model for poultry. Polymers 9 (10):. DOI : 10.3390/polym9100529

Talon R and Zagorec M. 2017. Special Issue: Beneficial Microorganisms for Food Manufacturing—Fermented and Biopreserved Foods and Beverages. Microorganisms 5 (4): 71. DOI : 10.3390/microorganisms5040071

Tottey W, Feria-Gervasio D, Gaci N, Laillet B, Pujos E, Martin J-F, Sebedio J-L, Sion B, Jarrige J-F, Alric M and Brugere J-F. 2017. Colonic Transit Time Is a Driven Force of the Gut Microbiota Composition and Metabolism: In Vitro Evidence. Journal of Neurogastroenterology and Motility 23 (1): 124-134. DOI : 10.5056/jnm16042

Uriot O, Denis S, Junjua M, Roussel Y, Dary-Mourot A and Blanquet-Diot S. 2017. Streptococcus thermophilus: From yogurt starter to a new promising probiotic candidate? Journal of Functional Foods 37 (Supplement C): 74-89. DOI : 10.1016/j.jff.2017.07.038